Ive uploaded my website 100x it seems. Today, I have added things to pages other than my homepage, but my homepage pics are now misplaced and not where I put them in VSD. I cant figure it out and have just deleted them. But, theyve been on there and have worked forever. Any ideas why that would happen?

Not without seeing the code, so if you could provide an URL...

My guess is that files weren't placed in the wrong spots, but the filenames might have swapped in between the 100 uploads (how VSD works, nothing you did). If that's the case, the problem is that IE or Firefox was most likely loading older images. I hope that made sense, I think even confused myself trying to explain that.

Clearing the cache should sort it then.